Number of Reads | 255,415,824 |
Valid Barcodes | 98.4% |
Reads Mapped Confidently to Transcriptome | 57.2% |
Reads Mapped Confidently to Exonic Regions | 61.5% |
Reads Mapped Confidently to Intronic Regions | 26.7% |
Reads Mapped Confidently to Intergenic Regions | 4.1% |
Sequencing Saturation | 90.6% |
Q30 Bases in Barcode | 97.4% |
Q30 Bases in RNA Read | 71.5% |
Q30 Bases in Sample Index | 80.5% |
Q30 Bases in UMI | 97.1% |
Estimated Number of Cells | 2,561 |
Fraction Reads in Cells | 88.7% |
Mean Reads per Cell | 99,732 |
Median Genes per Cell | 1,180 |
Total Genes Detected | 17,927 |
Median UMI Counts per Cell | 4,097 |
Name | pilot3_lane_8 |
Description | |
Transcriptome | hg19 |
Chemistry | Single Cell 3' v2 |
Cell Ranger Version | 1.3.0 |
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